Tuesday, October 14, 2008

Study pushes back origin of AIDS pandemic to 1908

Researchers think the growth of cities -- and high-risk behavior associated with urban life -- may have helped the virus to flourish. There is no cure for AIDS, which is most commonly transmitted through sexual contact.

Prior estimates put the origin of HIV at 1930. But Michael Worobey of the University of Arizona in Tucson now believes HIV began infecting humans between 1884 and 1924.

The research is based on 48-year-old gene fragments dug from a wax-embedded lymph node from a woman in Kinshasa in the Democratic Republic of Congo, formerly Zaire.

The 1960 sample is the second-oldest genetic sequence of HIV-1 group M, the main strain of the virus responsible for the AIDS pandemic.

The oldest sequence came from a 1959 blood sample given by a man in Kinshasa, formerly known as Leopoldville.

"Once you have two you can line them up and compare them," Worobey said in a telephone interview.

"Once you do that, you see these two sequences are very different. That means the virus had already been there for a long time even by 1959 or 1960."

CALIBRATING THE CLOCK

Putting the two samples together with dozens of other previously known HIV-1 genetic sequences, the researchers constructed family trees for this strain of HIV.

"Those old sequences helped calibrate the molecular clock, which is essentially the rate at which mutations accumulate in HIV," Worobey said.

"Once you have that rate, you can work backward and make a guess of when the ancestor of the whole pandemic strain of the AIDS virus originated. It is that ancestor we are dating to 1908 plus or minus about 20 years."

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